百洑傳息BIOFLUMEN & XENSOR LAB ← 線上工具 / Online ToolsNYCU · MEDTECH VIRTUAL LAB

CELL CULTURE · MICROSCOPY · EDUCATIONAL v0.1

Web-Trypan Blue

細胞存活率影像分析 Cell Viability Image Analyzer

上傳 Trypan Blue 染色的明視野顯微鏡照片,辨識候選細胞並依藍色染色特徵初步分類;逐顆人工覆核後計算存活率。支援選取 ROI、計數盤濃度換算,以及標註圖片與 CSV 匯出。Upload a brightfield Trypan Blue image, detect candidate cells, inspect staining-based classifications, correct each marker, and calculate cell viability. ROI selection, optional chamber concentration and local exports are included.

教學原型 · Educational prototype影像辨識採自行開發的傳統影像處理法,尚未經準確度驗證。染色、離焦、群聚與格線可能導致誤判;所有計數需人工確認。不得用於診斷、製程放行或臨床決策。
Rule-based computer vision; accuracy has not been validated. Focus, staining, overlap and grid lines may affect results. Manually verify all counts. Not for diagnosis or clinical decisions.

01 載入與設定 Upload & Settings

首次分析建議先用合成範例。深色染色細胞、背景亮度及相機白平衡都會影響判斷。Try the synthetic reference first. Results depend on dye appearance, illumination, and white balance.

02 人工覆核 Manual Review

ROI 模式拖曳矩形指定分析區;其餘模式點選既有標記可重新分類,點選空白處可新增標記。Drag to draw a rectangular ROI. In annotation modes, tap a marker to reclassify it or tap empty space to add a cell.

請上傳影像,或開啟合成示範。Upload an image or load the synthetic demo.

03 顯微影像 Microscopy Viewer

活細胞 / Live死細胞 / Dead待確認 / ReviewROI

04 統計與計算 Results & Calculations

活細胞 Live0
死細胞 Dead0
待確認 Review0
細胞存活率 Viability—

Cell viability (%) = Live ÷ (Live + Dead) × 100

待確認細胞不納入存活率分母;若存在待確認標記,數值為暫定結果。Unreviewed markers are excluded from the denominator. Results remain provisional until all markers are reviewed.

選用:計數盤濃度換算 Optional: Hemocytometer concentration

請先框選實際已知計數面積;完整 Neubauer 1 × 1 mm 大格,面積 1 mm²,標準深度 0.1 mm。若照片未校正計數區,請勿將結果作為細胞濃度。Select a physically known count area. A full Neubauer large square is 1 mm² at 0.1 mm depth. Uncalibrated fields cannot provide defensible cell concentrations.

活細胞濃度 Viable cells / mL—
總細胞濃度 Total cells / mL—

cells/mL = Count × dilution factor × 1000 ÷ (area [mm²] × depth [mm])

染色原理 Principle

完整細胞膜可排除 Trypan Blue;膜完整性受損的細胞呈藍色。此方法量測的是染劑排除能力,結果受染色時間、細胞種類及顯微影像品質影響。Trypan Blue exclusion reflects membrane integrity. Dye uptake, cell type, staining time and imaging conditions affect classification.

方法與限制 Method & Limitations

使用局部亮度閾值、形態學與連通區篩選尋找候選細胞,再以中心區域 B−R 色差推估藍色染色。相鄰細胞、離焦、染色沉澱及格線可能造成漏計或誤計;人工標記會保留在匯出檔。Local contrast, morphology and connected components detect candidates. Central blue chroma supports provisional classification. Overlaps, defocus, debris and grid lines remain sources of error.

文獻與程式說明 References & Source

Kuijpers L et al. PLoS ONE (2023), doi:10.1371/journal.pone.0291625;NIST Sources of error in cell viability measurement;Trypan Blue Exclusion protocol.

本站採原創前端實作,未複製上述研究的模型、標註資料或第三方 ImageJ 巨集。Original browser-only implementation. No third-party model, dataset or ImageJ macro is bundled.